Package | Description |
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org.mathIT.genes |
Provides classes to simulate biological amino acid sequences
and to use the genetic code
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Class and Description |
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AminoAcid
This enum represents the 22 natural amino acids forming proteins.
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Codon
This enum provides the 43 = 64 DNA codons made of the alphabet
T, C, A, G; associated to each cocon is the amino acid to which it is
transformed by the genetic code during the process of genetic expression.
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DNA
This class represents the DNA genome of a living organism.
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Genome
This class represents a genome of a living organism.
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ORF
This class represents an ORF (open reading frame), i.e., a possible gene
(or part of a gene) of a living organism coding a particular protein.
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Protein
This class represents a protein as a sequence of amino acids.
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RNACodon
This enum provides the 43 = 64 mRNA codons made of the alphabet
U, C, A, G; associated to each cocon is the amino acid to which it is
transformed by the genetic code during the process of genetic expression.
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